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Install or Uninstall e-mem on jollyroger

e-mem Efficient computation of Maximal Exact Matches for very large genomes does not use full text indexes. The algorithm uses much less space and is highly amenable to parallelization. It can compute all MEMs of minimum length 100 between the whole human and mouse genomes on a 12 core machine in 10 min and 2 GB of memory; the required memory can be as low as 600 MB. It can run efficiently genomes of any size. Extensive testing and comparison with currently best algorithms is provided. Parrot 3.7 science

Package Data

Packagee-mem
Version1.0.0-1
MaintainerDebian Med Packaging Team
DescriptionEfficient computation of Maximal Exact Matches for very large genomes does not use full text indexes. The algorithm uses much less space and is highly amenable to parallelization. It can compute all MEMs of minimum length 100 between the whole human and mouse genomes on a 12 core machine in 10 min and 2 GB of memory; the required memory can be as low as 600 MB. It can run efficiently genomes of any size. Extensive testing and comparison with currently best algorithms is provided.
Distroparrot
Releasejollyroger
Repomain
Sectionscience